EnhancerDB
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  3. rs549985315[chr17:70368601]
Enhancers that have rs549985315[chr17:70368601]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs549985315[chr17:70368601]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70368593 70368613 RREB1 JASPAR yes 55779233
chr17 70368598 70368608 SP1 JASPAR yes 55779234
chr17 70368599 70368607 SP1 TRANSFAC yes 55779235
chr17 70368601 70368613 INSM1 JASPAR yes 55779236
Genes associated with rs549985315[chr17:70368601], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More