EnhancerDB
  1. Home
  2. SNP
  3. rs549994837[chr2:223672837]
Enhancers that have rs549994837[chr2:223672837]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 223650265 223674035 enh19259
Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Lung (A549) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs549994837[chr2:223672837]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 223672831 223672841 POU6F2 JASPAR yes 81213696
chr2 223672832 223672842 GSX2 JASPAR yes 81213697
chr2 223672832 223672843 HOXC11 JASPAR yes 81213698
chr2 223672832 223672843 HOXC13 JASPAR yes 81213699
chr2 223672832 223672843 HOXD12 JASPAR yes 81213700
chr2 223672833 223672841 NKX6-1 JASPAR yes 81213701
chr2 223672833 223672841 NKX6-2 JASPAR yes 81213702
chr2 223672833 223672843 HOXC10 JASPAR yes 81213703
chr2 223672833 223672843 HOXD13 JASPAR yes 81213704
chr2 223672835 223672839 YY1 TRANSFAC yes 81213705
Genes associated with rs549994837[chr2:223672837], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More