EnhancerDB
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  3. rs549995291[chr1:228073236]
Enhancers that have rs549995291[chr1:228073236]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 228069592 228093895 enh12737
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Blood (T-cell) Lung Stomach Placenta Breast Embryonic Stem Cell Line (H1-hESC) Pancreas Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
chr1 228073191 228073261 vista5402
VISTA
Transcript factors that have rs549995291[chr1:228073236]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 228071432 228073682 ZNF274 GTRD no Blood (GM12878) 107876764
chr1 228071585 228073575 ZBTB33 GTRD no Lung (A549) 107876765
chr1 228072053 228073601 ZBTB33 GTRD no Lung (A549) 107876767
chr1 228072316 228073559 ZNF274 GTRD no Blood (GM12878) 107876768
chr1 228072370 228074595 TCF7L2 GTRD no Colon (HCT116) 107876769
chr1 228072459 228073484 ZNF274 GTRD no Bone Marrow (K562) 21388234
chr1 228072459 228073484 ZNF274 GTRD no Bone Marrow (K562) 107876770
chr1 228072579 228074663 TCF7L2 GTRD no Colon (HCT116) 107876772
chr1 228072843 228074594 TCF7L2 GTRD no Colon (HCT116) 107876773
chr1 228072913 228074553 TCF7L2 GTRD no Colon (HCT116) 107876774
chr1 228072920 228074595 ZNF143 GTRD no Epithelial (MCF-7) 21388236
chr1 228072920 228074595 ZNF143 GTRD no Epithelial (MCF-7) 107876775
chr1 228072984 228073272 ZNF274 GTRD no Blood (GM12878) 107876776
chr1 228073205 228074628 ZNF143 GTRD no Epithelial (MCF-7) 21388237
chr1 228073205 228074628 ZNF143 GTRD no Epithelial (MCF-7) 107876777
chr1 228073229 228074677 ZNF274 GTRD no Bone Marrow (K562) 21388238
chr1 228073229 228074677 ZNF274 GTRD no Bone Marrow (K562) 107876778
chr1 228073234 228073239 SP1 TRANSFAC yes 35890365
chr1 228073234 228073239 SP1 TRANSFAC yes 118473462
Genes associated with rs549995291[chr1:228073236], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More