EnhancerDB
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Enhancers that have rs550020272[chr18:56514728]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 56508646 56521424 enh17749
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Muscle (A673) Placenta Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Breast Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs550020272[chr18:56514728]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 56514528 56514804 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21824386
chr18 56514528 56514804 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108338657
chr18 56514529 56515019 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21824387
chr18 56514529 56515019 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108338658
chr18 56514541 56514801 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21824388
chr18 56514541 56514801 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108338659
chr18 56514558 56514934 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21824389
chr18 56514558 56514934 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108338660
chr18 56514564 56514888 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21824390
chr18 56514564 56514888 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108338661
chr18 56514569 56514979 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21824391
chr18 56514569 56514979 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108338662
chr18 56514653 56515253 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21824392
chr18 56514653 56515253 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108338663
chr18 56514656 56515326 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21824393
chr18 56514656 56515326 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108338664
chr18 56514701 56514953 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21824394
chr18 56514701 56514953 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108338665
chr18 56514725 56514736 ELK4 JASPAR yes 110983120
chr18 56514725 56514736 FLI1 JASPAR yes 110983121
chr18 56514726 56514736 ERF JASPAR yes 110983122
chr18 56514726 56514736 ERG JASPAR yes 110983123
chr18 56514726 56514736 ETS1 JASPAR yes 110983124
chr18 56514726 56514736 FEV JASPAR yes 110983125
chr18 56514726 56514736 FLI1 JASPAR yes 110983126
chr18 56514726 56514737 ETV2 JASPAR yes 110983127
chr18 56514728 56514734 ETS1 JASPAR yes 110983128
chr18 56514728 56514738 ELK1 JASPAR yes 110983129
Genes associated with rs550020272[chr18:56514728], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More