EnhancerDB
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  3. rs550034422[chr1:154818573]
Enhancers that have rs550034422[chr1:154818573]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154772139 154826495 enh644
Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Esophagus Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs550034422[chr1:154818573]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154818560 154818574 GLIS2 JASPAR yes 32318075
chr1 154818569 154818579 NFKB1 JASPAR yes 32318076
chr1 154818569 154818579 RELA JASPAR yes 32318077
chr1 154818569 154818579 REL JASPAR yes 32318078
chr1 154818569 154818580 NFKB1 JASPAR yes 32318079
Genes associated with rs550034422[chr1:154818573], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More