EnhancerDB
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  3. rs550044505[chr1:116196676]
Enhancers that have rs550044505[chr1:116196676]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116187765 116201595 enh27094
Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Esophagus Astrocyte Blood (GM12878) Stomach Muscle (A673) Peripheral Blood (MM.1S) Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs550044505[chr1:116196676]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116196671 116196690 CTCF JASPAR yes 31750868
chr1 116196674 116196688 GLIS2 JASPAR yes 31750869
chr1 116196674 116196689 ZIC4 JASPAR yes 31750870
chr1 116196676 116196689 TFAP2B JASPAR yes 31750871
chr1 116196676 116196689 TFAP2C JASPAR yes 31750872
Genes associated with rs550044505[chr1:116196676], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More