EnhancerDB
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  3. rs550048799[chr11:78054408]
Enhancers that have rs550048799[chr11:78054408]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 78053205 78068675 enh1913
Bone Marrow (K562) Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Ovary Astrocyte Stomach Muscle (A673) Placenta Thyroid Blood (Karpas-422) Lung (PC-9) Uterus Thymus Heart
Transcript factors that have rs550048799[chr11:78054408]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 78054401 78054413 TEF JASPAR yes 40018302
chr11 78054402 78054415 DUXA JASPAR yes 40018303
chr11 78054403 78054414 DUX4 JASPAR yes 40018304
chr11 78054403 78054414 PHOX2A JASPAR yes 40018305
chr11 78054403 78054414 PROP1 JASPAR yes 40018306
chr11 78054406 78054416 ALX3 JASPAR yes 40018307
chr11 78054406 78054416 EMX1 JASPAR yes 40018308
chr11 78054406 78054416 EMX2 JASPAR yes 40018309
chr11 78054406 78054416 EVX2 JASPAR yes 40018310
chr11 78054406 78054416 GSX1 JASPAR yes 40018311
chr11 78054406 78054416 GSX2 JASPAR yes 40018312
chr11 78054406 78054416 HOXA2 JASPAR yes 40018313
chr11 78054406 78054416 HOXB2 JASPAR yes 40018314
chr11 78054406 78054416 HOXB3 JASPAR yes 40018315
chr11 78054406 78054416 MEOX1 JASPAR yes 40018316
chr11 78054406 78054416 MEOX2 JASPAR yes 40018317
chr11 78054406 78054416 NOTO JASPAR yes 40018318
chr11 78054406 78054423 ZNF410 JASPAR yes 40018319
chr11 78054407 78054415 DLX6 JASPAR yes 40018320
chr11 78054407 78054415 EN1 JASPAR yes 40018321
chr11 78054407 78054415 LBX1 JASPAR yes 40018322
chr11 78054407 78054415 PAX4 JASPAR yes 40018323
chr11 78054407 78054415 PDX1 JASPAR yes 40018324
chr11 78054407 78054415 VAX1 JASPAR yes 40018325
chr11 78054407 78054415 VAX2 JASPAR yes 40018326
chr11 78054407 78054415 VSX1 JASPAR yes 40018327
chr11 78054407 78054415 VSX2 JASPAR yes 40018328
Genes associated with rs550048799[chr11:78054408], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More