EnhancerDB
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  3. rs550060258[chr16:28203583]
Enhancers that have rs550060258[chr16:28203583]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 28190945 28218035 enh3961
Skin (Keratinocyte) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Thymus Epithelial (MCF-7)
Transcript factors that have rs550060258[chr16:28203583]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 28203580 28203595 FOXP1 JASPAR yes 10221236
chr16 28203581 28203596 FOXP1 JASPAR yes 10221237
chr16 28203582 28203597 FOXP1 JASPAR yes 10221238
chr16 28203582 28203603 IRF1 JASPAR yes 10221239
chr16 28203583 28203598 FOXP1 JASPAR yes 10221240
chr16 28203583 28203604 IRF1 JASPAR yes 10221241
Genes associated with rs550060258[chr16:28203583], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More