EnhancerDB
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  3. rs550062872[chr17:53649055]
Enhancers that have rs550062872[chr17:53649055]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53639444 53669835 enh17231
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Lung (PC-9) Esophagus Astrocyte Liver Bone (Osteoblast) Blood (GM12878) Placenta Muscle (Myoblast) Breast Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs550062872[chr17:53649055]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53649049 53649064 FOXP1 JASPAR yes 54860320
chr17 53649050 53649071 IRF1 JASPAR yes 54860321
chr17 53649054 53649069 FOXP1 JASPAR yes 54860322
chr17 53649054 53649075 IRF1 JASPAR yes 54860323
chr17 53649055 53649070 FOXP1 JASPAR yes 54860324
chr17 53649055 53649076 IRF1 JASPAR yes 54860325
Genes associated with rs550062872[chr17:53649055], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More