EnhancerDB
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  3. rs550080559[chr11:66938456]
Enhancers that have rs550080559[chr11:66938456]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 66923765 66944023 enh1845
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Stomach Epithelial (MCF-7) Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs550080559[chr11:66938456]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 66938449 66938467 IRF2 JASPAR yes 39407911
chr11 66938450 66938471 IRF1 JASPAR yes 39407912
chr11 66938452 66938467 PRDM1 JASPAR yes 39407913
chr11 66938452 66938467 STAT2 JASPAR yes 39407914
chr11 66938453 66938467 STAT1 JASPAR yes 39407915
chr11 66938454 66938466 IRF1 JASPAR yes 39407916
chr11 66938454 66938468 IRF7 JASPAR yes 39407917
chr11 66938454 66938468 IRF8 JASPAR yes 39407918
chr11 66938454 66938469 IRF9 JASPAR yes 39407919
Genes associated with rs550080559[chr11:66938456], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More