EnhancerDB
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  3. rs550089392[chr19:4989350]
Enhancers that have rs550089392[chr19:4989350]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4966316 4995955 enh4974
Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs550089392[chr19:4989350]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4989335 4989350 FOXP1 JASPAR yes 112203062
chr19 4989337 4989357 RREB1 JASPAR yes 112203065
chr19 4989338 4989358 RREB1 JASPAR yes 112203066
chr19 4989341 4989361 RREB1 JASPAR yes 112203067
chr19 4989342 4989362 RREB1 JASPAR yes 112203068
chr19 4989345 4989351 TCF4 TRANSFAC yes 112203069
chr19 4989345 4989357 FOXI1 JASPAR yes 112203070
chr19 4989345 4989360 FOXP1 JASPAR yes 112203071
chr19 4989345 4989365 RREB1 JASPAR yes 112203072
chr19 4989346 4989366 RREB1 JASPAR yes 112203073
chr19 4989349 4989361 FOXI1 JASPAR yes 112203074
Genes associated with rs550089392[chr19:4989350], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More