EnhancerDB
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  3. rs550090478[chr6:109619247]
Enhancers that have rs550090478[chr6:109619247]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 109611505 109631621 enh23489
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Brain (SK-N-SH) Bone (Osteoblast) Stomach Placenta Colon (HCT116) Lung (PC-9) Pancreas Uterus Heart
Transcript factors that have rs550090478[chr6:109619247]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 109619237 109619252 HSF1 JASPAR yes 104240839
chr6 109619242 109619257 HSF1 JASPAR yes 104240840
chr6 109619243 109619256 HSF4 JASPAR yes 104240841
chr6 109619247 109619257 SMAD3 JASPAR yes 104240842
Genes associated with rs550090478[chr6:109619247], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More