EnhancerDB
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  3. rs550142679[chr8:11313146]
Enhancers that have rs550142679[chr8:11313146]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr8 11281762 11322135 enh10162
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Prostate (RWPE1) Heart
chr8 11312887 11313950 vista58222
VISTA
Transcript factors that have rs550142679[chr8:11313146]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr8 11313138 11313158 RREB1 JASPAR yes 43135341
chr8 11313138 11313158 RREB1 JASPAR yes 68315149
chr8 11313140 11313160 RREB1 JASPAR yes 43135342
chr8 11313140 11313160 RREB1 JASPAR yes 68315150
chr8 11313142 11313162 RREB1 JASPAR yes 43135343
chr8 11313142 11313162 RREB1 JASPAR yes 68315151
chr8 11313143 11313151 MGA JASPAR yes 43135344
chr8 11313143 11313151 TBX15 JASPAR yes 43135345
chr8 11313143 11313151 TBX1 JASPAR yes 43135346
chr8 11313143 11313151 TBX4 JASPAR yes 43135347
chr8 11313143 11313151 TBX5 JASPAR yes 43135348
chr8 11313143 11313151 MGA JASPAR yes 68315152
chr8 11313143 11313151 TBX15 JASPAR yes 68315153
chr8 11313143 11313151 TBX1 JASPAR yes 68315154
chr8 11313143 11313151 TBX4 JASPAR yes 68315155
chr8 11313143 11313151 TBX5 JASPAR yes 68315156
chr8 11313146 11313166 RREB1 JASPAR yes 43135349
chr8 11313146 11313166 RREB1 JASPAR yes 68315157
Genes associated with rs550142679[chr8:11313146], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More