EnhancerDB
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  3. rs550164703[chr1:172885792]
Enhancers that have rs550164703[chr1:172885792]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172860479 172890491 enh12377
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs550164703[chr1:172885792]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172882070 172886039 ZNF274 GTRD no Bone Marrow (K562) 107846255
chr1 172885190 172886234 ZNF274 GTRD no Cervix (HeLa-S3) 21350440
chr1 172885274 172886257 ZNF274 GTRD no Cervix (HeLa-S3) 21350441
chr1 172885278 172886593 TCF7L2 GTRD no Colon (HCT116) 21350442
chr1 172885294 172885885 ZNF274 GTRD no Cervix (HeLa-S3) 21350443
chr1 172885352 172886710 TCF7L2 GTRD no Colon (HCT116) 21350444
chr1 172885360 172886434 TCF7L2 GTRD no Colon (HCT116) 21350445
chr1 172885399 172886238 ZNF274 GTRD no Cervix (HeLa-S3) 21350446
chr1 172885774 172885792 SRF JASPAR yes 33165933
chr1 172885787 172885792 GATA2 JASPAR yes 33165937
chr1 172885788 172885802 POU1F1 JASPAR yes 33165938
chr1 172885789 172885801 POU3F1 JASPAR yes 33165939
chr1 172885789 172885804 MEF2C JASPAR yes 33165940
Genes associated with rs550164703[chr1:172885792], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More