EnhancerDB
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  3. rs550174129[chr1:117877374]
Enhancers that have rs550174129[chr1:117877374]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117874505 117891355 enh12197
Prostate (PC-3) Large Intestine Placenta Peripheral Blood (MM.1S) Uterus Lung (PC-9) Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs550174129[chr1:117877374]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117877360 117877377 RARA JASPAR yes 31874067
chr1 117877369 117877378 THAP1 JASPAR yes 31874068
chr1 117877371 117877384 ELF1 JASPAR yes 31874069
chr1 117877372 117877376 LFA1 TRANSFAC yes 31874070
chr1 117877374 117877384 GABPA JASPAR yes 31874071
Genes associated with rs550174129[chr1:117877374], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More