EnhancerDB
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  3. rs550178182[chr1:27024342]
Enhancers that have rs550178182[chr1:27024342]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27017585 27036395 enh166
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Blood (T-cell) Epithelial (MCF-7) Stomach Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs550178182[chr1:27024342]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27021500 27025301 POLR2A UCSC Txn Factor no Conserved 107802551
chr1 27024331 27024351 RREB1 JASPAR yes 27649568
chr1 27024336 27024351 NR2C2 JASPAR yes 27649569
chr1 27024336 27024357 ZNF263 JASPAR yes 27649570
chr1 27024338 27024348 SP1 JASPAR yes 27649571
chr1 27024338 27024359 ZNF263 JASPAR yes 27649572
chr1 27024339 27024359 RREB1 JASPAR yes 27649573
chr1 27024342 27024356 PLAG1 JASPAR yes 27649574
Genes associated with rs550178182[chr1:27024342], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More