EnhancerDB
  1. Home
  2. SNP
  3. rs550186680[chr15:40346745]
Enhancers that have rs550186680[chr15:40346745]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 40334765 40353183 enh16060
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
chr15 40346483 40347151 vista19717
VISTA
Transcript factors that have rs550186680[chr15:40346745]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 40344689 40349243 AR GTRD no Prostate (PC-3) 21649476
chr15 40344689 40349243 AR GTRD no Prostate (PC-3) 108133763
chr15 40346457 40347300 ZNF274 GTRD no Bone Marrow (K562) 108133769
chr15 40346635 40349469 ZNF143 GTRD no Epithelial (MCF-7) 21649483
chr15 40346635 40349469 ZNF143 GTRD no Epithelial (MCF-7) 108133770
chr15 40346722 40346845 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21649484
chr15 40346722 40346845 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108133771
chr15 40346735 40346746 EBF1 JASPAR yes 22923855
chr15 40346735 40346746 EBF1 JASPAR yes 70511332
chr15 40346738 40347251 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21649485
chr15 40346738 40347251 RUNX3 UCSC Txn Factor no Conserved 108133772
chr15 40346738 40347251 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108133773
Genes associated with rs550186680[chr15:40346745], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More