EnhancerDB
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  3. rs550223534[chr7:2135338]
Enhancers that have rs550223534[chr7:2135338]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr7 2129984 2180255 enh9566
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs550223534[chr7:2135338]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr7 2135331 2135345 PLAG1 JASPAR yes 12512413
chr7 2135332 2135349 ESR1 JASPAR yes 12512414
chr7 2135334 2135338 LFA1 TRANSFAC yes 12512415
Genes associated with rs550223534[chr7:2135338], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More