EnhancerDB
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  3. rs550242539[chr17:2468445]
Enhancers that have rs550242539[chr17:2468445]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2463945 2470593 enh47992
Skin (Keratinocyte) Cervix (HeLa-S3) Prostate (RWPE1) Large Intestine Esophagus Stomach Lung (PC-9) Thymus Epithelial (MCF-7)
Transcript factors that have rs550242539[chr17:2468445]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2468197 2468537 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21739671
chr17 2468200 2468530 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21739672
chr17 2468201 2468597 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21739673
chr17 2468206 2468526 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21739674
chr17 2468223 2468679 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21739675
chr17 2468232 2468502 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21739676
chr17 2468268 2468498 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21739677
chr17 2468274 2468501 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21739678
chr17 2468397 2468753 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21739679
chr17 2468423 2468879 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21739680
chr17 2468444 2468454 SP1 JASPAR yes 52759391
Genes associated with rs550242539[chr17:2468445], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More