EnhancerDB
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  3. rs550252379[chr17:38464642]
Enhancers that have rs550252379[chr17:38464642]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38463228 38485935 enh4408
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Lung (PC-9) Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Uterus Blood (T-cell) Heart
chr17 38464298 38464708 vista24695
VISTA
Transcript factors that have rs550252379[chr17:38464642]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38462965 38466208 ZNF274 GTRD no Cervix (HeLa-S3) 21753519
chr17 38462965 38466208 ZNF274 GTRD no Cervix (HeLa-S3) 108254225
chr17 38462965 38466208 ZNF274 GTRD no Cervix (HeLa-S3) 108254226
chr17 38463205 38467357 TCF7L2 GTRD no Colon (HCT116) 108254233
chr17 38463205 38467357 TCF7L2 GTRD no Colon (HCT116) 108254234
chr17 38463205 38467357 TCF7L2 GTRD no Colon (HCT116) 108254235
chr17 38463495 38466274 ZNF274 GTRD no Bone Marrow (K562) 21753530
chr17 38463495 38466274 ZNF274 GTRD no Bone Marrow (K562) 108254258
chr17 38463495 38466274 ZNF274 GTRD no Bone Marrow (K562) 108254259
chr17 38463573 38465932 ZNF274 GTRD no Cervix (HeLa-S3) 21753533
chr17 38463573 38465932 ZNF274 GTRD no Cervix (HeLa-S3) 108254263
chr17 38463573 38465932 ZNF274 GTRD no Cervix (HeLa-S3) 108254264
chr17 38463625 38465804 ZBTB33 GTRD no Lung (A549) 108254265
chr17 38463625 38465804 ZBTB33 GTRD no Lung (A549) 108254266
chr17 38463754 38466090 ZBTB33 GTRD no Lung (A549) 108254273
chr17 38463803 38466651 ZBTB33 GTRD no Lung (A549) 108254275
chr17 38463803 38466651 ZBTB33 GTRD no Lung (A549) 108254276
chr17 38463819 38466186 ZBTB33 GTRD no Lung (A549) 108254277
chr17 38463820 38464942 ZBTB33 GTRD no Lung (A549) 108254278
chr17 38464031 38464977 ZNF274 GTRD no Cervix (HeLa-S3) 21753540
chr17 38464031 38464977 ZNF274 GTRD no Cervix (HeLa-S3) 108254281
chr17 38464043 38464717 ZNF274 GTRD no Blood (GM12878) 21753541
chr17 38464043 38464717 ZNF274 GTRD no Blood (GM12878) 108254282
chr17 38464051 38465948 ZBTB33 GTRD no Brain (SK-N-SH) 108254283
chr17 38464098 38465976 ZNF274 GTRD no Cervix (HeLa-S3) 21753542
chr17 38464098 38465976 ZNF274 GTRD no Cervix (HeLa-S3) 108254284
chr17 38464110 38465809 ZBTB33 GTRD no Brain (SK-N-SH) 108254285
chr17 38464117 38465756 ZBTB33 GTRD no Brain (SK-N-SH) 108254286
chr17 38464122 38466519 TCF7L2 GTRD no Colon (HCT116) 108254287
chr17 38464122 38466519 TCF7L2 GTRD no Colon (HCT116) 108254288
chr17 38464138 38465921 ZNF274 GTRD no Cervix (HeLa-S3) 21753544
chr17 38464138 38465921 ZNF274 GTRD no Cervix (HeLa-S3) 108254290
chr17 38464155 38467395 TCF7L2 GTRD no Colon (HCT116) 108254291
chr17 38464155 38467395 TCF7L2 GTRD no Colon (HCT116) 108254292
chr17 38464182 38465644 ZBTB33 GTRD no Brain (SK-N-SH) 108254295
chr17 38464184 38466136 TCF7L2 GTRD no Colon (HCT116) 108254296
chr17 38464258 38465793 ZNF274 GTRD no Cervix (HeLa-S3) 21753553
chr17 38464258 38465793 ZNF274 GTRD no Cervix (HeLa-S3) 108254303
chr17 38464265 38465483 ZBTB33 GTRD no Brain (SK-N-SH) 108254304
chr17 38464267 38465973 ZNF274 GTRD no Cervix (HeLa-S3) 21753554
chr17 38464267 38465973 ZNF274 GTRD no Cervix (HeLa-S3) 108254305
chr17 38464275 38465710 ZBTB33 GTRD no Lung (A549) 108254306
chr17 38464277 38465280 TCF7L2 GTRD no Colon (HCT116) 108254307
chr17 38464288 38465033 ZNF274 GTRD no Cervix (HeLa-S3) 21753555
chr17 38464288 38465033 ZNF274 GTRD no Cervix (HeLa-S3) 108254308
chr17 38464310 38467071 TCF7L2 GTRD no Colon (HCT116) 108254310
chr17 38464310 38467071 TCF7L2 GTRD no Colon (HCT116) 108254311
chr17 38464364 38465760 ZBTB33 GTRD no Brain (SK-N-SH) 108254312
chr17 38464366 38466952 TCF7L2 GTRD no Colon (HCT116) 108254313
chr17 38464366 38466952 TCF7L2 GTRD no Colon (HCT116) 108254314
chr17 38464377 38465748 ZBTB33 GTRD no Lung (A549) 108254315
chr17 38464379 38465930 TCF7L2 GTRD no Colon (HCT116) 108254316
chr17 38464389 38465362 ZNF274 GTRD no Bone Marrow (K562) 21753557
chr17 38464389 38465362 ZNF274 GTRD no Bone Marrow (K562) 108254317
chr17 38464391 38465910 ZBTB33 GTRD no Lung (A549) 108254318
chr17 38464405 38464937 ZNF274 GTRD no Bone Marrow (K562) 21753558
chr17 38464405 38464937 ZNF274 GTRD no Bone Marrow (K562) 108254319
chr17 38464408 38465862 ZBTB33 GTRD no Brain (SK-N-SH) 108254320
chr17 38464447 38465260 ZBTB33 GTRD no Lung (A549) 108254321
chr17 38464519 38465148 ZNF274 GTRD no Bone Marrow (K562) 21753559
chr17 38464519 38465148 ZNF274 GTRD no Bone Marrow (K562) 108254322
chr17 38464552 38465520 ZNF274 GTRD no Bone Marrow (K562) 21753560
chr17 38464552 38465520 ZNF274 GTRD no Bone Marrow (K562) 108254323
chr17 38464554 38465329 ZBTB33 GTRD no Brain (SK-N-SH) 108254324
chr17 38464560 38465001 ZNF274 GTRD no Bone Marrow (K562) 21753561
chr17 38464560 38465001 ZNF274 GTRD no Bone Marrow (K562) 108254325
chr17 38464570 38465312 ZNF274 GTRD no Bone Marrow (K562) 21753562
chr17 38464570 38465312 ZNF274 GTRD no Bone Marrow (K562) 108254326
chr17 38464602 38465005 ZNF274 GTRD no Bone Marrow (K562) 21753563
chr17 38464602 38465005 ZNF274 GTRD no Bone Marrow (K562) 108254327
chr17 38464606 38465292 TCF7L2 GTRD no Colon (HCT116) 108254328
chr17 38464610 38465383 TCF7L2 GTRD no Colon (HCT116) 108254329
chr17 38464630 38464648 NR3C1 JASPAR yes 21233062
chr17 38464630 38464648 NR3C1 JASPAR yes 54203378
chr17 38464631 38464642 FOXC1 JASPAR yes 21233063
chr17 38464631 38464642 FOXC1 JASPAR yes 54203379
chr17 38464636 38465227 ZNF274 GTRD no Bone Marrow (K562) 21753564
chr17 38464636 38465227 ZNF274 GTRD no Bone Marrow (K562) 108254330
Genes associated with rs550252379[chr17:38464642], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More