EnhancerDB
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  3. rs550271013[chr17:66376566]
Enhancers that have rs550271013[chr17:66376566]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 66370825 66389975 enh17332
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Liver Lung Stomach Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Heart
Transcript factors that have rs550271013[chr17:66376566]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 66374146 66376580 ZNF143 GTRD no Epithelial (MCF-7) 21782833
chr17 66374146 66376580 ZNF143 GTRD no Epithelial (MCF-7) 108287071
chr17 66374146 66376580 ZNF143 GTRD no Epithelial (MCF-7) 108287072
chr17 66375767 66377007 ZNF143 GTRD no Epithelial (MCF-7) 21782926
chr17 66375767 66377007 ZNF143 GTRD no Epithelial (MCF-7) 108287255
chr17 66376054 66376993 ZNF143 GTRD no Epithelial (MCF-7) 21782927
chr17 66376054 66376993 ZNF143 GTRD no Epithelial (MCF-7) 108287256
chr17 66376560 66376570 POU6F2 JASPAR yes 55574214
chr17 66376560 66376575 HNF1A JASPAR yes 55574215
chr17 66376561 66376571 EMX1 JASPAR yes 55574216
chr17 66376561 66376571 EMX2 JASPAR yes 55574217
chr17 66376561 66376571 ESX1 JASPAR yes 55574218
chr17 66376561 66376571 EVX1 JASPAR yes 55574219
chr17 66376561 66376571 EVX2 JASPAR yes 55574220
chr17 66376561 66376571 GBX2 JASPAR yes 55574221
chr17 66376561 66376571 HESX1 JASPAR yes 55574222
chr17 66376561 66376571 HOXA2 JASPAR yes 55574223
chr17 66376561 66376571 HOXB2 JASPAR yes 55574224
chr17 66376561 66376571 HOXB3 JASPAR yes 55574225
chr17 66376561 66376571 LHX2 JASPAR yes 55574226
chr17 66376561 66376571 LHX6 JASPAR yes 55574227
chr17 66376561 66376571 MEOX1 JASPAR yes 55574228
chr17 66376561 66376571 MEOX2 JASPAR yes 55574229
chr17 66376561 66376571 POU6F1 JASPAR yes 55574230
chr17 66376561 66376571 RAX JASPAR yes 55574231
chr17 66376561 66376574 HNF1B JASPAR yes 55574232
chr17 66376562 66376570 LBX1 JASPAR yes 55574233
chr17 66376562 66376570 PDX1 JASPAR yes 55574234
chr17 66376562 66376570 VAX1 JASPAR yes 55574235
chr17 66376562 66376570 VAX2 JASPAR yes 55574236
chr17 66376562 66376570 VSX1 JASPAR yes 55574237
chr17 66376562 66376570 VSX2 JASPAR yes 55574238
chr17 66376562 66376578 POU4F2 JASPAR yes 55574239
chr17 66376562 66376578 POU4F3 JASPAR yes 55574240
chr17 66376563 66376578 FOXA1 JASPAR yes 55574241
chr17 66376564 66376576 FOXI1 JASPAR yes 55574242
chr17 66376564 66376578 POU4F1 JASPAR yes 55574243
chr17 66376564 66376579 HNF1A JASPAR yes 55574244
chr17 66376565 66376577 FOXC2 JASPAR yes 55574245
chr17 66376565 66376578 HNF1B JASPAR yes 55574246
chr17 66376565 66376579 ONECUT2 JASPAR yes 55574247
chr17 66376565 66376579 ONECUT3 JASPAR yes 55574248
chr17 66376565 66376579 POU4F1 JASPAR yes 55574249
chr17 66376566 66376577 FOXB1 JASPAR yes 55574250
chr17 66376566 66376577 FOXC1 JASPAR yes 55574251
chr17 66376566 66376577 PROP1 JASPAR yes 55574252
chr17 66376566 66376582 POU4F2 JASPAR yes 55574253
chr17 66376566 66376582 POU4F3 JASPAR yes 55574254
Genes associated with rs550271013[chr17:66376566], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More