EnhancerDB
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  3. rs550299061[chr2:232230359]
Enhancers that have rs550299061[chr2:232230359]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232224984 232232485 enh19319
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Brain (SK-N-SH) Astrocyte Muscle (A673) Placenta Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs550299061[chr2:232230359]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232229633 232230547 GATA2 UCSC Txn Factor no Conserved 108435669
chr2 232230351 232230359 GATA3 JASPAR yes 81714314
chr2 232230359 232230373 GATA2 JASPAR yes 81714315
Genes associated with rs550299061[chr2:232230359], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More