EnhancerDB
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  3. rs550300431[chr12:112020266]
Enhancers that have rs550300431[chr12:112020266]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 112004625 112027035 enh14993
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs550300431[chr12:112020266]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 112017928 112020694 AR GTRD no Prostate (PC-3) 21573774
chr12 112017928 112020694 AR GTRD no Prostate (PC-3) 108059826
chr12 112018051 112025115 ZBTB33 GTRD no Lung (A549) 21573775
chr12 112018051 112025115 ZBTB33 GTRD no Lung (A549) 108059827
chr12 112020246 112020267 IRF1 JASPAR yes 123757073
chr12 112020258 112020273 ZIC3 JASPAR yes 123757075
chr12 112020258 112020273 ZIC4 JASPAR yes 123757076
chr12 112020259 112020273 ZIC1 JASPAR yes 123757077
chr12 112020265 112020275 TBX21 JASPAR yes 123757078
chr12 112020265 112020276 TBX20 JASPAR yes 123757079
chr12 112020265 112020276 TBX2 JASPAR yes 123757080
chr12 112020265 112020278 EOMES JASPAR yes 123757081
chr12 112020266 112020274 MGA JASPAR yes 123757082
chr12 112020266 112020274 TBX15 JASPAR yes 123757083
chr12 112020266 112020274 TBX1 JASPAR yes 123757084
chr12 112020266 112020274 TBX4 JASPAR yes 123757085
chr12 112020266 112020274 TBX5 JASPAR yes 123757086
Genes associated with rs550300431[chr12:112020266], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More