EnhancerDB
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  3. rs550357210[chr12:52424566]
Enhancers that have rs550357210[chr12:52424566]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52415565 52430755 enh2354
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Blood (T-cell) Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Pancreas Pancreas (Panc1) Uterus Thymus Heart
Transcript factors that have rs550357210[chr12:52424566]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52423532 52425076 TCF7L2 GTRD no Colon (HCT116) 21546010
chr12 52423532 52425076 TCF7L2 GTRD no Colon (HCT116) 108032903
chr12 52424566 52424572 YY1 JASPAR yes 120914261
Genes associated with rs550357210[chr12:52424566], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More