EnhancerDB
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  3. rs550408208[chr16:88272982]
Enhancers that have rs550408208[chr16:88272982]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88258045 88283355 enh32027
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung (PC-9) Bone (Osteoblast) Stomach Colon (HCT116) Brain (SK-N-SH) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs550408208[chr16:88272982]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88272522 88272986 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21735587
chr16 88272973 88272982 NKX3-2 JASPAR yes 12269547
chr16 88272973 88272983 NKX2-3 JASPAR yes 12269548
chr16 88272981 88272985 TEAD2 TRANSFAC yes 12269549
chr16 88272981 88272986 TBP TRANSFAC yes 12269550
chr16 88272981 88272987 TFIID TRANSFAC yes 12269551
Genes associated with rs550408208[chr16:88272982], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More