EnhancerDB
  1. Home
  2. SNP
  3. rs550422868[chr3:9458639]
Enhancers that have rs550422868[chr3:9458639]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 9436025 9464855 enh6987
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Ovary Lung (PC-9) Astrocyte Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Blood (T-cell) Heart
Transcript factors that have rs550422868[chr3:9458639]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 9458633 9458647 GATA2 JASPAR yes 350784
chr3 9458635 9458643 GATA3 JASPAR yes 350785
chr3 9458635 9458656 IRF1 JASPAR yes 350786
chr3 9458638 9458644 TBP TRANSFAC yes 350787
chr3 9458639 9458654 STAT2 JASPAR yes 350788
Genes associated with rs550422868[chr3:9458639], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More