EnhancerDB
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  3. rs550453605[chr16:88274603]
Enhancers that have rs550453605[chr16:88274603]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88258045 88283355 enh32027
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung (PC-9) Bone (Osteoblast) Stomach Colon (HCT116) Brain (SK-N-SH) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs550453605[chr16:88274603]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88273658 88275261 TEF1 GTRD no Bone (Osteoblast) 21735591
chr16 88274332 88274622 ZNF274 GTRD no Liver (HepG2) 21735593
chr16 88274590 88274603 TFAP2A JASPAR yes 12269900
chr16 88274601 88274606 SP1 TRANSFAC yes 12269901
Genes associated with rs550453605[chr16:88274603], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More