EnhancerDB
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  3. rs550453896[chr5:150025704]
Enhancers that have rs550453896[chr5:150025704]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 149998886 150027071 enh22720
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs550453896[chr5:150025704]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 150025700 150025704 LFA1 TRANSFAC yes 66897786
Genes associated with rs550453896[chr5:150025704], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More