EnhancerDB
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  3. rs550466960[chr14:50375907]
Enhancers that have rs550466960[chr14:50375907]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 50362765 50389315 enh3174
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs550466960[chr14:50375907]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 50375907 50375917 HOXC10 JASPAR yes 115207029
chr14 50375907 50375917 HOXD11 JASPAR yes 115207030
chr14 50375907 50375918 HOXA10 JASPAR yes 115207031
chr14 50375907 50375918 HOXC11 JASPAR yes 115207032
chr14 50375907 50375918 HOXC12 JASPAR yes 115207033
chr14 50375907 50375918 HOXD12 JASPAR yes 115207034
Genes associated with rs550466960[chr14:50375907], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More