EnhancerDB
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  3. rs550476635[chr16:88305095]
Enhancers that have rs550476635[chr16:88305095]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88291992 88310485 enh16901
Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Lung Heart
Transcript factors that have rs550476635[chr16:88305095]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88303566 88305632 TEF1 GTRD no Bone (Osteoblast) 21735730
chr16 88303659 88305296 ZBTB33 GTRD no Brain (SK-N-SH) 21735731
chr16 88303772 88305277 ZBTB33 GTRD no Brain (SK-N-SH) 21735734
chr16 88303778 88305386 ZBTB33 GTRD no Brain (SK-N-SH) 21735735
chr16 88303901 88305323 AR GTRD no Prostate (PC-3) 21735739
chr16 88303925 88305706 ZBTB33 GTRD no Lung (A549) 21735741
chr16 88303931 88305945 ZBTB33 GTRD no Lung (A549) 21735742
chr16 88303944 88305147 ZBTB33 GTRD no Brain (SK-N-SH) 21735744
chr16 88303948 88305111 ZBTB33 GTRD no Brain (SK-N-SH) 21735745
chr16 88303994 88305172 ZBTB33 GTRD no Lung (A549) 21735750
chr16 88304014 88305131 ZBTB33 GTRD no Brain (SK-N-SH) 21735751
chr16 88304028 88305920 ZBTB33 GTRD no Lung (A549) 21735754
chr16 88304063 88305142 ZBTB33 GTRD no Lung (A549) 21735756
chr16 88304075 88305292 ZBTB33 GTRD no Brain (SK-N-SH) 21735758
chr16 88304155 88305233 MYOD GTRD no Muscle (Myoblast) 21735765
chr16 88304358 88306207 ZBTB33 GTRD no Lung (A549) 21735772
chr16 88304890 88306784 ZNF143 GTRD no Epithelial (MCF-7) 21735774
chr16 88305057 88306317 ZBTB33 GTRD no Lung (A549) 21735775
chr16 88305088 88305106 ESR1 JASPAR yes 12272670
Genes associated with rs550476635[chr16:88305095], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More