EnhancerDB
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  3. rs550572255[chr12:124865843]
Enhancers that have rs550572255[chr12:124865843]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 124862183 124886902 enh2671
Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Muscle (A673) Heart
Transcript factors that have rs550572255[chr12:124865843]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 124864989 124866737 ZNF143 GTRD no Epithelial (MCF-7) 21580388
chr12 124864989 124866737 ZNF143 GTRD no Epithelial (MCF-7) 108067457
chr12 124864989 124866737 ZNF143 GTRD no Epithelial (MCF-7) 108067458
chr12 124865277 124866436 ZNF143 GTRD no Epithelial (MCF-7) 21580389
chr12 124865277 124866436 ZNF143 GTRD no Epithelial (MCF-7) 108067459
chr12 124865418 124866594 ZNF143 GTRD no Epithelial (MCF-7) 21580390
chr12 124865418 124866594 ZNF143 GTRD no Epithelial (MCF-7) 108067460
chr12 124865499 124866496 ZNF143 GTRD no Epithelial (MCF-7) 21580391
chr12 124865499 124866496 ZNF143 GTRD no Epithelial (MCF-7) 108067461
chr12 124865509 124866400 ZNF143 GTRD no Epithelial (MCF-7) 21580392
chr12 124865509 124866400 ZNF143 GTRD no Epithelial (MCF-7) 108067462
chr12 124865512 124866607 ZNF143 GTRD no Epithelial (MCF-7) 21580393
chr12 124865512 124866607 ZNF143 GTRD no Epithelial (MCF-7) 108067463
chr12 124865554 124866405 ZNF143 GTRD no Epithelial (MCF-7) 21580394
chr12 124865554 124866405 ZNF143 GTRD no Epithelial (MCF-7) 108067464
chr12 124865830 124865843 POU3F3 JASPAR yes 124371837
chr12 124865831 124865843 POU2F1 JASPAR yes 124371838
chr12 124865841 124865862 ZNF263 JASPAR yes 124371842
chr12 124865843 124865854 FLI1 JASPAR yes 124371843
Genes associated with rs550572255[chr12:124865843], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More