EnhancerDB
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  3. rs550625147[chr19:4811187]
Enhancers that have rs550625147[chr19:4811187]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4796225 4815632 enh17875
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Ovary Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Pancreas (Panc1) Muscle (Myoblast) Pancreas Spleen Uterus Heart
Transcript factors that have rs550625147[chr19:4811187]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4810975 4813607 TCF7L2 GTRD no Colon (HCT116) 21842252
chr19 4810975 4813607 TCF7L2 GTRD no Colon (HCT116) 108373065
chr19 4811179 4811188 SNAI2 JASPAR yes 112192311
chr19 4811179 4811189 FIGLA JASPAR yes 112192312
chr19 4811179 4811189 TCF3 JASPAR yes 112192313
chr19 4811182 4811195 NFKB1 JASPAR yes 112192314
chr19 4811184 4811190 ZNF354C JASPAR yes 112192315
chr19 4811187 4811198 USF1 JASPAR yes 112192316
chr19 4811187 4811198 USF2 JASPAR yes 112192317
Genes associated with rs550625147[chr19:4811187], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More