EnhancerDB
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  3. rs550687536[chr12:96590190]
Enhancers that have rs550687536[chr12:96590190]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96582645 96638775 enh14921
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs550687536[chr12:96590190]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96590178 96590198 RREB1 JASPAR yes 123045563
chr12 96590183 96590203 RREB1 JASPAR yes 123045564
chr12 96590186 96590206 RREB1 JASPAR yes 123045565
chr12 96590188 96590208 RREB1 JASPAR yes 123045566
chr12 96590189 96590209 RREB1 JASPAR yes 123045567
chr12 96590190 96590210 RREB1 JASPAR yes 123045568
Genes associated with rs550687536[chr12:96590190], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More