EnhancerDB
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  3. rs550707906[chr19:3342358]
Enhancers that have rs550707906[chr19:3342358]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3331365 3352459 enh17861
Cervix (HeLa-S3) Prostate (RWPE1) Ovary Esophagus Blood (T-cell) Lung (PC-9) Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Colon (HCT116) Breast Thyroid Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs550707906[chr19:3342358]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3341490 3342423 TCF7L2 GTRD no Colon (HCT116) 21838734
chr19 3342350 3342365 HNF4G JASPAR yes 112121399
chr19 3342351 3342365 RXRG JASPAR yes 112121400
chr19 3342351 3342366 HNF4A JASPAR yes 112121401
chr19 3342356 3342369 NR2F1 JASPAR yes 112121402
Genes associated with rs550707906[chr19:3342358], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More