EnhancerDB
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  3. rs550731454[chr6:11834721]
Enhancers that have rs550731454[chr6:11834721]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 11826525 11837655 enh72166
Bone Marrow (K562) Blood (GM12878) Peripheral Blood (MM.1S) Pancreas Spleen Neural Stem Cells (H9) Stomach
chr6 11834601 11834816 vista50872
VISTA
Transcript factors that have rs550731454[chr6:11834721]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 11834176 11834987 NFIC UCSC Txn Factor no Conserved 108538474
chr6 11834381 11834857 STAT5A UCSC Txn Factor no Conserved 108538475
chr6 11834430 11834907 FOXM1 UCSC Txn Factor no Conserved 108538477
chr6 11834480 11834892 ATF2 UCSC Txn Factor no Conserved 108538479
chr6 11834506 11834977 EP300 UCSC Txn Factor no Conserved 108538480
chr6 11834508 11834913 RELA UCSC Txn Factor no Conserved 108538481
chr6 11834523 11834851 RUNX3 UCSC Txn Factor no Conserved 108538482
chr6 11834548 11834866 MEF2A UCSC Txn Factor no Conserved 108538483
chr6 11834558 11834851 MEF2C UCSC Txn Factor no Conserved 108538484
chr6 11834568 11834807 SP1 UCSC Txn Factor no Conserved 108538485
chr6 11834568 11834851 TCF3 UCSC Txn Factor no Conserved 108538486
chr6 11834573 11834816 BCL11A UCSC Txn Factor no Conserved 108538487
chr6 11834575 11834852 TCF12 UCSC Txn Factor no Conserved 108538488
chr6 11834711 11834721 NHLH1 JASPAR yes 70311733
chr6 11834711 11834721 NHLH1 JASPAR yes 99920324
chr6 11834714 11834728 E2F7 JASPAR yes 70311734
chr6 11834714 11834728 E2F7 JASPAR yes 99920325
chr6 11834715 11834726 E2F1 JASPAR yes 70311735
chr6 11834715 11834726 E2F1 JASPAR yes 99920326
Genes associated with rs550731454[chr6:11834721], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More