EnhancerDB
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  3. rs550734502[chr17:70375695]
Enhancers that have rs550734502[chr17:70375695]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs550734502[chr17:70375695]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70375305 70375803 ZNF274 GTRD no Cervix (HeLa-S3) 21784385
chr17 70375394 70375794 ZNF274 GTRD no Blood (GM12878) 21784387
chr17 70375536 70375828 ZBTB33 GTRD no Brain (SK-N-SH) 21784388
chr17 70375568 70375813 ZNF274 GTRD no Blood (GM12878) 21784389
chr17 70375676 70375697 IRF1 JASPAR yes 55780242
chr17 70375680 70375695 STAT2 JASPAR yes 55780243
Genes associated with rs550734502[chr17:70375695], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More