EnhancerDB
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  3. rs550741525[chr16:89459721]
Enhancers that have rs550741525[chr16:89459721]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89459543 89478115 enh32029
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-SH) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Colon (HCT116) Pancreas Thymus Heart
Transcript factors that have rs550741525[chr16:89459721]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89459702 89459723 IRF1 JASPAR yes 12339620
chr16 89459705 89459726 IRF1 JASPAR yes 12339622
chr16 89459707 89459722 FOXP1 JASPAR yes 12339623
chr16 89459710 89459725 MEF2A JASPAR yes 12339624
chr16 89459711 89459726 FOXP1 JASPAR yes 12339625
chr16 89459711 89459726 MEF2C JASPAR yes 12339626
chr16 89459711 89459732 IRF1 JASPAR yes 12339627
chr16 89459712 89459724 FOXC2 JASPAR yes 12339628
chr16 89459712 89459724 MEF2A JASPAR yes 12339629
chr16 89459712 89459724 MEF2B JASPAR yes 12339630
chr16 89459712 89459724 MEF2D JASPAR yes 12339631
chr16 89459713 89459723 MEF2A JASPAR yes 12339632
chr16 89459715 89459727 IRF1 JASPAR yes 12339634
chr16 89459715 89459729 IRF7 JASPAR yes 12339635
chr16 89459716 89459737 IRF1 JASPAR yes 12339636
chr16 89459717 89459732 FOXP1 JASPAR yes 12339637
chr16 89459717 89459738 IRF1 JASPAR yes 12339638
chr16 89459718 89459730 FOXC2 JASPAR yes 12339639
chr16 89459720 89459724 YY1 TRANSFAC yes 12339640
chr16 89459721 89459736 FOXP1 JASPAR yes 12339641
Genes associated with rs550741525[chr16:89459721], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More