EnhancerDB
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  3. rs550750826[chr12:117354358]
Enhancers that have rs550750826[chr12:117354358]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 117350745 117365303 enh2616
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs550750826[chr12:117354358]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 117354348 117354363 FOXP1 JASPAR yes 124031980
chr12 117354354 117354364 HOXA13 JASPAR yes 124031981
chr12 117354354 117354364 HOXB13 JASPAR yes 124031982
chr12 117354354 117354364 HOXD13 JASPAR yes 124031983
chr12 117354355 117354365 ALX3 JASPAR yes 124031984
chr12 117354355 117354365 ESX1 JASPAR yes 124031985
chr12 117354355 117354365 GSX1 JASPAR yes 124031986
chr12 117354355 117354365 GSX2 JASPAR yes 124031987
chr12 117354355 117354365 LBX2 JASPAR yes 124031988
chr12 117354355 117354365 MIXL1 JASPAR yes 124031989
chr12 117354355 117354365 RAX JASPAR yes 124031990
chr12 117354356 117354364 BARX1 JASPAR yes 124031991
chr12 117354356 117354364 BSX JASPAR yes 124031992
chr12 117354356 117354364 DLX6 JASPAR yes 124031993
chr12 117354356 117354364 ISX JASPAR yes 124031994
chr12 117354356 117354364 LBX1 JASPAR yes 124031995
chr12 117354356 117354364 LHX9 JASPAR yes 124031996
chr12 117354356 117354364 MSX1 JASPAR yes 124031997
chr12 117354356 117354364 MSX2 JASPAR yes 124031998
chr12 117354356 117354364 NKX6-2 JASPAR yes 124031999
chr12 117354356 117354364 PRRX1 JASPAR yes 124032000
chr12 117354356 117354364 RAX2 JASPAR yes 124032001
chr12 117354356 117354364 SHOX JASPAR yes 124032002
chr12 117354356 117354364 UNCX JASPAR yes 124032003
Genes associated with rs550750826[chr12:117354358], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More