EnhancerDB
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  3. rs550754194[chr1:154451336]
Enhancers that have rs550754194[chr1:154451336]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154447249 154470672 enh12277
Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Lung Blood (OCI-LY7) Lung (A549) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Stomach Pancreas (Panc1) Spleen Uterus Blood (T-cell) Heart
Transcript factors that have rs550754194[chr1:154451336]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154451321 154451336 SCRT1 JASPAR yes 32294715
chr1 154451327 154451346 CTCF JASPAR yes 32294716
chr1 154451329 154451348 CTCF JASPAR yes 32294717
chr1 154451331 154451341 FIGLA JASPAR yes 32294718
chr1 154451333 154451338 USF2 TRANSFAC yes 32294719
Genes associated with rs550754194[chr1:154451336], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More