EnhancerDB
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  3. rs550762692[chr1:52436702]
Enhancers that have rs550762692[chr1:52436702]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52426231 52441515 enh26698
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Large Intestine Liver Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Stomach
Transcript factors that have rs550762692[chr1:52436702]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52436681 52436702 IRF1 JASPAR yes 28880011
chr1 52436682 52436703 IRF1 JASPAR yes 28880013
chr1 52436683 52436704 IRF1 JASPAR yes 28880015
chr1 52436684 52436705 IRF1 JASPAR yes 28880017
chr1 52436685 52436706 IRF1 JASPAR yes 28880019
chr1 52436686 52436707 IRF1 JASPAR yes 28880021
chr1 52436687 52436702 FOXP1 JASPAR yes 28880022
chr1 52436687 52436708 IRF1 JASPAR yes 28880023
chr1 52436688 52436703 FOXP1 JASPAR yes 28880024
chr1 52436688 52436709 IRF1 JASPAR yes 28880025
chr1 52436689 52436704 FOXP1 JASPAR yes 28880026
chr1 52436689 52436710 IRF1 JASPAR yes 28880027
chr1 52436690 52436705 FOXP1 JASPAR yes 28880028
chr1 52436690 52436711 IRF1 JASPAR yes 28880029
chr1 52436691 52436706 FOXP1 JASPAR yes 28880030
chr1 52436693 52436708 FOXP1 JASPAR yes 28880031
chr1 52436694 52436715 IRF1 JASPAR yes 28880032
chr1 52436695 52436710 FOXP1 JASPAR yes 28880033
chr1 52436698 52436712 SPIC JASPAR yes 28880034
chr1 52436698 52436712 STAT1 JASPAR yes 28880035
chr1 52436698 52436713 PRDM1 JASPAR yes 28880036
chr1 52436698 52436713 STAT2 JASPAR yes 28880037
chr1 52436698 52436719 IRF1 JASPAR yes 28880038
chr1 52436702 52436717 PRDM1 JASPAR yes 28880039
Genes associated with rs550762692[chr1:52436702], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More