EnhancerDB
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  3. rs550823158[chr17:70395780]
Enhancers that have rs550823158[chr17:70395780]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr17 70395717 70396043 vista25804
VISTA
Transcript factors that have rs550823158[chr17:70395780]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70395579 70396246 EP300 UCSC Txn Factor no Conserved 108289837
chr17 70395595 70396065 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21784530
chr17 70395595 70396065 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108289838
chr17 70395617 70396241 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21784531
chr17 70395617 70396241 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108289839
chr17 70395617 70396775 TCF7L2 UCSC Txn Factor no Conserved 108289840
chr17 70395634 70396230 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21784532
chr17 70395634 70396230 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108289841
chr17 70395663 70396220 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21784533
chr17 70395663 70396220 NFIC UCSC Txn Factor no Conserved 108289842
chr17 70395663 70396220 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108289843
chr17 70395680 70396191 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21784534
chr17 70395680 70396191 FOXA2 UCSC Txn Factor no Conserved 108289844
chr17 70395680 70396191 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108289845
chr17 70395689 70396191 FOXA1 UCSC Txn Factor no Conserved 108289846
chr17 70395695 70396184 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21784535
chr17 70395695 70396184 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108289847
chr17 70395702 70396191 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21784536
chr17 70395702 70396191 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108289848
chr17 70395715 70396055 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21784537
chr17 70395715 70396055 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108289849
chr17 70395717 70395941 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21784538
chr17 70395717 70395941 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108289850
chr17 70395722 70396226 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108289851
chr17 70395748 70396128 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21784539
chr17 70395748 70396128 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108289852
chr17 70395757 70396147 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21784540
chr17 70395757 70396147 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108289853
chr17 70395760 70396191 TCF12 UCSC Txn Factor no Conserved 108289854
chr17 70395760 70396191 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108289855
Genes associated with rs550823158[chr17:70395780], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More