EnhancerDB
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  3. rs550848228[chr2:220509887]
Enhancers that have rs550848228[chr2:220509887]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 220504474 220513641 enh19249
Prostate (PC-3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Placenta Colon (HCT116) Muscle (Myoblast) Uterus Heart
Transcript factors that have rs550848228[chr2:220509887]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 220509876 220509888 IRF1 JASPAR yes 81041588
chr2 220509876 220509890 IRF7 JASPAR yes 81041589
chr2 220509887 220509891 LFA1 TRANSFAC yes 81041590
Genes associated with rs550848228[chr2:220509887], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More