EnhancerDB
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  3. rs550870880[chr3:119072659]
Enhancers that have rs550870880[chr3:119072659]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 119060185 119083075 enh20836
Brain (SK-N-MC) Blood (T-cell) Esophagus Lung Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Spleen Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs550870880[chr3:119072659]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 119072638 119072659 IRF1 JASPAR yes 5165670
chr3 119072641 119072662 IRF1 JASPAR yes 5165674
chr3 119072645 119072660 PRDM1 JASPAR yes 5165676
chr3 119072645 119072660 STAT2 JASPAR yes 5165677
Genes associated with rs550870880[chr3:119072659], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More