EnhancerDB
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  3. rs550927798[chr17:70370360]
Enhancers that have rs550927798[chr17:70370360]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs550927798[chr17:70370360]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70370058 70370434 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21784370
chr17 70370340 70370784 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21784371
chr17 70370348 70370361 TFAP2A JASPAR yes 55779467
chr17 70370356 70370360 LFA1 TRANSFAC yes 55779469
Genes associated with rs550927798[chr17:70370360], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More