EnhancerDB
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  3. rs550940316[chr1:52129595]
Enhancers that have rs550940316[chr1:52129595]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52122845 52134475 enh26695
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Esophagus Astrocyte Liver Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs550940316[chr1:52129595]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52129577 52129598 IRF1 JASPAR yes 28860990
chr1 52129581 52129596 STAT2 JASPAR yes 28860992
chr1 52129581 52129599 IRF2 JASPAR yes 28860993
Genes associated with rs550940316[chr1:52129595], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More