EnhancerDB
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  3. rs550950539[chr11:10429187]
Enhancers that have rs550950539[chr11:10429187]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 10394025 10442255 enh13756
Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs550950539[chr11:10429187]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 10429185 10429195 POU6F2 JASPAR yes 37315884
chr11 10429186 10429196 GSX1 JASPAR yes 37315885
chr11 10429186 10429196 GSX2 JASPAR yes 37315886
chr11 10429186 10429197 HOXC13 JASPAR yes 37315887
chr11 10429187 10429195 NKX6-1 JASPAR yes 37315888
chr11 10429187 10429195 NKX6-2 JASPAR yes 37315889
Genes associated with rs550950539[chr11:10429187], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More