EnhancerDB
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  3. rs550956113[chr1:113183113]
Enhancers that have rs550956113[chr1:113183113]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 113174365 113185519 enh568
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (A549) Blood (GM12878) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myotube) Blood (T-cell) Stomach
Transcript factors that have rs550956113[chr1:113183113]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 113183104 113183114 SP1 JASPAR yes 31584175
chr1 113183107 113183117 ZNF740 JASPAR yes 31584177
chr1 113183108 113183118 SP1 JASPAR yes 31584178
chr1 113183108 113183118 ZNF740 JASPAR yes 31584179
chr1 113183113 113183126 NFKB2 JASPAR yes 31584180
Genes associated with rs550956113[chr1:113183113], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More