EnhancerDB
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  3. rs550964394[chr19:2495402]
Enhancers that have rs550964394[chr19:2495402]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2481141 2509475 enh4958
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs550964394[chr19:2495402]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2493500 2495679 ZBTB33 GTRD no Lung (A549) 108360455
chr19 2493534 2495622 ZBTB33 GTRD no Lung (A549) 108360456
chr19 2493553 2496728 ZNF274 GTRD no Cervix (HeLa-S3) 21835645
chr19 2493553 2496728 ZNF274 GTRD no Cervix (HeLa-S3) 108360457
chr19 2493553 2496728 ZNF274 GTRD no Cervix (HeLa-S3) 108360458
chr19 2493608 2495632 ZBTB33 GTRD no Lung (A549) 108360459
chr19 2493689 2495889 ZBTB33 GTRD no Lung (A549) 108360461
chr19 2493689 2495889 ZBTB33 GTRD no Lung (A549) 108360462
chr19 2493814 2495424 ZBTB33 GTRD no Lung (A549) 108360463
chr19 2493877 2496024 TCF7L2 GTRD no Colon (HCT116) 108360464
chr19 2493877 2496024 TCF7L2 GTRD no Colon (HCT116) 108360465
chr19 2493888 2495459 ZNF274 GTRD no Liver (HepG2) 21835646
chr19 2493888 2495459 ZNF274 GTRD no Liver (HepG2) 108360466
chr19 2493890 2495406 ZNF274 GTRD no Bone Marrow (K562) 21835647
chr19 2493890 2495406 ZNF274 GTRD no Bone Marrow (K562) 108360467
chr19 2493902 2496299 TCF7L2 GTRD no Colon (HCT116) 108360468
chr19 2493902 2496299 TCF7L2 GTRD no Colon (HCT116) 108360469
chr19 2493915 2496279 TCF7L2 GTRD no Colon (HCT116) 108360470
chr19 2493915 2496279 TCF7L2 GTRD no Colon (HCT116) 108360471
chr19 2493933 2495825 ZBTB33 GTRD no Lung (A549) 108360472
chr19 2493933 2495825 ZBTB33 GTRD no Lung (A549) 108360473
chr19 2493950 2495609 ZNF143 GTRD no Epithelial (MCF-7) 21835648
chr19 2493950 2495609 ZNF143 GTRD no Epithelial (MCF-7) 108360474
chr19 2493953 2496192 TCF7L2 GTRD no Colon (HCT116) 108360475
chr19 2493953 2496192 TCF7L2 GTRD no Colon (HCT116) 108360476
chr19 2493968 2496356 TCF7L2 GTRD no Colon (HCT116) 108360477
chr19 2493968 2496356 TCF7L2 GTRD no Colon (HCT116) 108360478
chr19 2493974 2495627 ZBTB33 GTRD no Lung (A549) 108360479
chr19 2493980 2495614 ZBTB33 GTRD no Lung (A549) 108360480
chr19 2493987 2495710 ZNF143 GTRD no Epithelial (MCF-7) 21835649
chr19 2493987 2495710 ZNF143 GTRD no Epithelial (MCF-7) 108360481
chr19 2493992 2496814 ZNF274 GTRD no Blood (GM12878) 108360482
chr19 2493992 2496814 ZNF274 GTRD no Blood (GM12878) 108360483
chr19 2494032 2496113 TCF7L2 GTRD no Colon (HCT116) 108360485
chr19 2494032 2496113 TCF7L2 GTRD no Colon (HCT116) 108360486
chr19 2494055 2495496 ZBTB33 GTRD no Lung (A549) 108360489
chr19 2494058 2495694 ZNF274 GTRD no Blood (GM12878) 108360490
chr19 2494064 2495501 ZNF274 GTRD no Bone Marrow (K562) 21835653
chr19 2494064 2495501 ZNF274 GTRD no Bone Marrow (K562) 108360492
chr19 2494088 2496193 ZNF143 GTRD no Epithelial (MCF-7) 21835654
chr19 2494088 2496193 ZNF143 GTRD no Epithelial (MCF-7) 108360495
chr19 2494088 2496193 ZNF143 GTRD no Epithelial (MCF-7) 108360496
chr19 2494094 2495678 ZNF274 GTRD no Blood (GM12878) 108360497
chr19 2494094 2496160 ZBTB33 GTRD no Brain (SK-N-SH) 108360498
chr19 2494094 2496160 ZBTB33 GTRD no Brain (SK-N-SH) 108360499
chr19 2494144 2495587 ZBTB33 GTRD no Lung (A549) 108360506
chr19 2494148 2495546 ZNF274 GTRD no Cervix (HeLa-S3) 21835660
chr19 2494148 2495546 ZNF274 GTRD no Cervix (HeLa-S3) 108360507
chr19 2494193 2495667 ZNF274 GTRD no Blood (GM12878) 108360509
chr19 2494233 2495767 ZNF143 GTRD no Epithelial (MCF-7) 21835661
chr19 2494233 2495767 ZNF143 GTRD no Epithelial (MCF-7) 108360513
chr19 2494251 2495778 ZNF274 GTRD no Blood (GM12878) 108360514
chr19 2494254 2495863 TCF7L2 GTRD no Colon (HCT116) 108360515
chr19 2494254 2495863 TCF7L2 GTRD no Colon (HCT116) 108360516
chr19 2494281 2495625 ZNF143 GTRD no Epithelial (MCF-7) 21835662
chr19 2494281 2495625 ZNF143 GTRD no Epithelial (MCF-7) 108360517
chr19 2494296 2495740 ZNF274 GTRD no Cervix (HeLa-S3) 21835665
chr19 2494296 2495740 ZNF274 GTRD no Cervix (HeLa-S3) 108360520
chr19 2494309 2495443 ZNF274 GTRD no Bone Marrow (K562) 21835666
chr19 2494309 2495443 ZNF274 GTRD no Bone Marrow (K562) 108360524
chr19 2494334 2495472 ZNF274 GTRD no Liver (HepG2) 21835667
chr19 2494334 2495472 ZNF274 GTRD no Liver (HepG2) 108360525
chr19 2494369 2495441 ZNF274 GTRD no Bone Marrow (K562) 21835669
chr19 2494369 2495441 ZNF274 GTRD no Bone Marrow (K562) 108360529
chr19 2494401 2495715 POLR2A UCSC Txn Factor no Conserved 108360534
chr19 2494415 2495775 ZNF274 GTRD no Bone Marrow (K562) 21835673
chr19 2494415 2495775 ZNF274 GTRD no Bone Marrow (K562) 108360536
chr19 2494424 2495712 ZNF143 GTRD no Epithelial (MCF-7) 21835676
chr19 2494424 2495712 ZNF143 GTRD no Epithelial (MCF-7) 108360541
chr19 2494425 2495877 ZNF143 GTRD no Epithelial (MCF-7) 21835677
chr19 2494425 2495877 ZNF143 GTRD no Epithelial (MCF-7) 108360542
chr19 2494425 2495877 ZNF143 GTRD no Epithelial (MCF-7) 108360543
chr19 2494430 2495416 ZNF274 GTRD no Blood (GM12878) 108360544
chr19 2494432 2495882 TCF7L2 GTRD no Colon (HCT116) 108360545
chr19 2494432 2495882 TCF7L2 GTRD no Colon (HCT116) 108360546
chr19 2494450 2496024 ZBTB33 GTRD no Brain (SK-N-SH) 108360552
chr19 2494450 2496024 ZBTB33 GTRD no Brain (SK-N-SH) 108360553
chr19 2494461 2495432 ZNF274 GTRD no Blood (GM12878) 108360554
chr19 2494467 2495436 ZNF274 GTRD no Bone Marrow (K562) 21835680
chr19 2494467 2495436 ZNF274 GTRD no Bone Marrow (K562) 108360555
chr19 2494474 2495974 ZNF274 GTRD no Blood (GM12878) 108360557
chr19 2494474 2495974 ZNF274 GTRD no Blood (GM12878) 108360558
chr19 2494476 2495435 ZNF274 GTRD no Blood (GM12878) 108360559
chr19 2494484 2495461 ZNF274 GTRD no Liver (HepG2) 21835683
chr19 2494484 2495461 ZNF274 GTRD no Liver (HepG2) 108360561
chr19 2494492 2496222 TCF7L2 GTRD no Colon (HCT116) 108360562
chr19 2494492 2496222 TCF7L2 GTRD no Colon (HCT116) 108360563
chr19 2494495 2495727 ZNF274 GTRD no Bone Marrow (K562) 21835684
chr19 2494495 2495727 ZNF274 GTRD no Bone Marrow (K562) 108360564
chr19 2494533 2495764 ZNF143 GTRD no Epithelial (MCF-7) 21835686
chr19 2494533 2495764 ZNF143 GTRD no Epithelial (MCF-7) 108360569
chr19 2494570 2495573 TCF7L2 GTRD no Colon (HCT116) 108360575
chr19 2494605 2495442 ZNF274 GTRD no Blood (GM12878) 108360577
chr19 2494609 2495867 ZNF274 GTRD no Bone Marrow (K562) 21835691
chr19 2494609 2495867 ZNF274 GTRD no Bone Marrow (K562) 108360578
chr19 2494609 2495867 ZNF274 GTRD no Bone Marrow (K562) 108360579
chr19 2494746 2496306 ZNF274 GTRD no Cervix (HeLa-S3) 21835702
chr19 2494746 2496306 ZNF274 GTRD no Cervix (HeLa-S3) 108360595
chr19 2494746 2496306 ZNF274 GTRD no Cervix (HeLa-S3) 108360596
chr19 2494749 2496165 ZNF274 GTRD no Cervix (HeLa-S3) 21835703
chr19 2494749 2496165 ZNF274 GTRD no Cervix (HeLa-S3) 108360597
chr19 2494749 2496165 ZNF274 GTRD no Cervix (HeLa-S3) 108360598
chr19 2494767 2495930 ZBTB33 GTRD no Brain (SK-N-SH) 108360602
chr19 2494767 2495930 ZBTB33 GTRD no Brain (SK-N-SH) 108360603
chr19 2494824 2495717 ZNF274 GTRD no Cervix (HeLa-S3) 21835713
chr19 2494824 2495717 ZNF274 GTRD no Cervix (HeLa-S3) 108360615
chr19 2494834 2495669 ZBTB33 GTRD no Brain (SK-N-SH) 108360617
chr19 2494862 2495621 ZBTB33 GTRD no Lung (A549) 108360622
chr19 2494897 2495531 ZNF143 GTRD no Epithelial (MCF-7) 21835720
chr19 2494897 2495531 ZNF143 GTRD no Epithelial (MCF-7) 108360625
chr19 2494897 2495541 ZNF143 GTRD no Epithelial (MCF-7) 21835721
chr19 2494897 2495541 ZNF143 GTRD no Epithelial (MCF-7) 108360626
chr19 2494908 2495676 ZBTB33 GTRD no Lung (A549) 108360628
chr19 2494918 2495548 ZNF274 GTRD no Cervix (HeLa-S3) 21835723
chr19 2494918 2495548 ZNF274 GTRD no Cervix (HeLa-S3) 108360629
chr19 2494957 2495667 ZNF274 GTRD no Cervix (HeLa-S3) 21835725
chr19 2494957 2495667 ZNF274 GTRD no Cervix (HeLa-S3) 108360631
chr19 2494967 2495437 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108360632
chr19 2494983 2495639 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21835726
chr19 2494983 2495639 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108360633
chr19 2495100 2495668 ZNF143 GTRD no Epithelial (MCF-7) 21835731
chr19 2495100 2495668 ZNF143 GTRD no Epithelial (MCF-7) 108360639
chr19 2495108 2495891 ZNF274 GTRD no Blood (GM12878) 108360640
chr19 2495108 2495891 ZNF274 GTRD no Blood (GM12878) 108360641
chr19 2495181 2495471 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21835732
chr19 2495208 2496803 TCF7L2 GTRD no Colon (HCT116) 108360642
chr19 2495223 2495687 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21835733
chr19 2495242 2495612 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21835734
chr19 2495246 2495626 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21835735
chr19 2495281 2496448 ZNF274 GTRD no Bone Marrow (K562) 21835736
chr19 2495281 2496448 ZNF274 GTRD no Bone Marrow (K562) 108360643
chr19 2495285 2495689 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21835737
chr19 2495322 2495692 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21835738
chr19 2495326 2496424 ZNF143 GTRD no Epithelial (MCF-7) 21835739
chr19 2495326 2496424 ZNF143 GTRD no Epithelial (MCF-7) 108360644
chr19 2495334 2496583 ZNF143 GTRD no Epithelial (MCF-7) 21835740
chr19 2495334 2496583 ZNF143 GTRD no Epithelial (MCF-7) 108360645
chr19 2495359 2495536 ZNF274 GTRD no Liver (HepG2) 21835741
chr19 2495399 2495411 NHLH1 JASPAR yes 112066506
chr19 2495400 2495410 NHLH1 JASPAR yes 112066507
Genes associated with rs550964394[chr19:2495402], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More