EnhancerDB
  1. Home
  2. SNP
  3. rs551425301[chr2:28597161]
Enhancers that have rs551425301[chr2:28597161]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28576025 28608635 enh18385
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs551425301[chr2:28597161]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28597150 28597164 TLX1 JASPAR yes 72643764
chr2 28597151 28597165 TLX1 JASPAR yes 72643765
chr2 28597152 28597162 SP1 TRANSFAC yes 72643766
chr2 28597154 28597166 E2F1 JASPAR yes 72643767
Genes associated with rs551425301[chr2:28597161], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More