EnhancerDB
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  3. rs551849700[chr6:139431669]
Enhancers that have rs551849700[chr6:139431669]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 139428765 139439451 enh9383
Skin (Keratinocyte) Brain (SK-N-MC) Blood (T-cell) Esophagus Blood (OCI-LY7) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myotube) Uterus Thymus
Transcript factors that have rs551849700[chr6:139431669]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 139431659 139431672 DUXA JASPAR yes 105764415
chr6 139431660 139431671 DUX4 JASPAR yes 105764416
chr6 139431660 139431671 PHOX2A JASPAR yes 105764417
chr6 139431660 139431671 PROP1 JASPAR yes 105764418
chr6 139431662 139431673 HOXA10 JASPAR yes 105764419
chr6 139431663 139431673 EMX1 JASPAR yes 105764420
chr6 139431663 139431673 GBX2 JASPAR yes 105764421
chr6 139431663 139431673 GSX1 JASPAR yes 105764422
chr6 139431663 139431673 GSX2 JASPAR yes 105764423
chr6 139431663 139431673 HOXB2 JASPAR yes 105764424
chr6 139431663 139431673 HOXB3 JASPAR yes 105764425
chr6 139431663 139431673 MEOX1 JASPAR yes 105764426
chr6 139431663 139431673 MEOX2 JASPAR yes 105764427
chr6 139431663 139431673 MIXL1 JASPAR yes 105764428
chr6 139431663 139431673 MNX1 JASPAR yes 105764429
chr6 139431664 139431672 LMX1A JASPAR yes 105764430
chr6 139431664 139431672 LMX1B JASPAR yes 105764431
chr6 139431664 139431672 NKX6-1 JASPAR yes 105764432
chr6 139431664 139431672 NKX6-2 JASPAR yes 105764433
chr6 139431664 139431672 PDX1 JASPAR yes 105764434
chr6 139431664 139431672 VAX1 JASPAR yes 105764435
chr6 139431664 139431672 VAX2 JASPAR yes 105764436
chr6 139431664 139431672 VSX1 JASPAR yes 105764437
Genes associated with rs551849700[chr6:139431669], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More